dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04923
Location and strand information: 2146 - 2430 (+)
Family: 3.A.1.125.1
Protein type: TC
Protein description: Lipoprotein-releasing system ATP-binding protein LolD

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04924
Location and strand information: 2403 - 2858 (+)
Family: HATPase_c
Protein type: STP
Protein description: Sensor protein CzcS

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04925
Location and strand information: 2884 - 4152 (-)
Family: GH43|CBM6|CBM42|GH43_2
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 5.2141
Protein molecular weight: 47587.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04926
Location and strand information: 4503 - 5513 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04927
Location and strand information: 5822 - 7546 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7206
Protein molecular weight: 64641.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04928
Location and strand information: 7674 - 8684 (+)
Family: LacI
Protein type: TF
Protein description: Ribose operon repressor

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04929
Location and strand information: 8787 - 11861 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7253
Protein molecular weight: 117321.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04930
Location and strand information: 11938 - 14463 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000287_122|CGC1
Gene ID: MGYG000000287_04931
Location and strand information: 15206 - 16057 (+)
Family: 3.A.1.149.1
Protein type: TC
Protein description: ABC transporter ATP-binding protein NatA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinogalactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000287_04923	Lipoprotein-releasing system ATP-binding protein LolD	TC	2146	2430	+	3.A.1.125.1
MGYG000000287_04924	Sensor protein CzcS	STP	2403	2858	+	HATPase_c
MGYG000000287_04925	Xylosidase/arabinosidase	CAZyme	2884	4152	-	GH43\| CBM6\| CBM42\| GH43_2
MGYG000000287_04926	HTH-type transcriptional repressor CytR	TF	4503	5513	+	LacI
MGYG000000287_04927	hypothetical protein	CAZyme	5822	7546	+	GH78
MGYG000000287_04928	Ribose operon repressor	TF	7674	8684	+	LacI
MGYG000000287_04929	hypothetical protein	CAZyme	8787	11861	+	GH106
MGYG000000287_04930	hypothetical protein	null	11938	14463	+	Bac_rhamnosid6H\| Bac_rhamnosid_C
MGYG000000287_04931	ABC transporter ATP-binding protein NatA	TC	15206	16057	+	3.A.1.149.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature